Patrick,
Sorry that you are seeing this issue. I ran few quick tests with prod deployment but could not replicate the issue at my end.
Can you please give us some more details?
1. How did you export the WAR? Did you do it manually from the deployment location?
2. How exactly are you deploying the WAR to production and on which server? If you are using our tooling then it is possible that CodeLive is re-injected.
3. Is the server used for prod deployment configured in MyEclipse IDE with CodeLive enabled?
Apologies for inconvenience caused.
–Swapna
Genuitec Support