Gianluca84,
It is a known issue and we already have a bug filed for it. I am afraid I cannot give you a timeline for the fix at this point of time. We will keep you posted about the fix schedule.
As a workaround, you can copy the stack trace from the console to the ‘Java Stack Trace Console’ which displays the stack trace in a nice formatted manner providing the hyperlink support to jump to the code location.
Sorry for inconvenience caused.
–Swapna
MyEclipse Support